Information for 10-CCGCAGAGTT (Motif 10)

A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T
Reverse Opposite:
G T C A C G T A A G T C A C G T A T G C A C G T A T C G A T G C A C T G A T C G
p-value:1e-10
log p-value:-2.404e+01
Information Content per bp:1.845
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif127.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets51.1 +/- 26.9bp
Average Position of motif in Background48.6 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGCAGAGTT--
--GCAGTGATTT
 A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCGCAGAGTT
AAACCGCAAA---
 A C G T A C G T A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCGCAGAGTT
AAACCGCAA----
 A C G T A C G T A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CCGCAGAGTT
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAGAGTT
AAACCACAGAN--
 A C G T A C G T A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAGAGTT
TACCCGCATN---
 A C G T A C G T A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGCAGAGTT
CCTGCTGAGH-
 A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCGCAGAGTT-----
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCGCAGAGTT
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCGCAGAGTT-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A T G C A G T C A T C G A T G C G T C A A T C G T G C A A C T G G C A T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T