Information for 1-GCYMCGCCCM (Motif 1)

C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A
Reverse Opposite:
C A G T C T A G C T A G A T C G A G T C C T A G C A T G C T A G C T A G G T A C
p-value:1e-141
log p-value:-3.267e+02
Information Content per bp:1.689
Number of Target Sequences with motif458.0
Percentage of Target Sequences with motif48.36%
Number of Background Sequences with motif6492.3
Percentage of Background Sequences with motif13.82%
Average Position of motif in Targets50.9 +/- 25.0bp
Average Position of motif in Background49.3 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GCYMCGCCCM--
GCTCCGCCCMCY
 C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--GCYMCGCCCM--
NAGCCCCGCCCCCN
 A C G T A C G T C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GCYMCGCCCM---
NRGCCCCRCCCHBNN
 A C G T A C G T C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GCYMCGCCCM-
GGCCCCGCCCCC
 A C G T C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---GCYMCGCCCM---
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GCYMCGCCCM--
GCCMCGCCCMCY
 C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A A C G T A C G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GCYMCGCCCM
GCCCCGCCCC
 C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GCYMCGCCCM
GCCCCACCCA
 C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCYMCGCCCM
GCCMCRCCCH
 C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GCYMCGCCCM-
GCCACGCCCCC
 C A T G G A T C G A T C G T A C A G T C C T A G A T G C A G T C A G T C G T C A A C G T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C