Information for 4-GTAYTYTMTKAYM (Motif 6)

A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C
Reverse Opposite:
A C T G C T A G A C G T G T C A C T G A A C T G C G T A C T G A C G T A C T A G A C G T G T C A A G T C
p-value:1e-6
log p-value:-1.596e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.3 +/- 25.6bp
Average Position of motif in Background47.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0046.1_Hoxa10/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTAYTYTMTKAYM--
TNAATTTTATTACCTN
A C G T A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTAYTYTMTKAYM
--NTTTTATGAC-
A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAYTYTMTKAYM---
NAATTTTATTACCNNN
A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0012.1_Cdx1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTAYTYTMTKAYM---
NAATTTTATTACCTNN
A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTAYTYTMTKAYM-
---TTTTATGGCTN
A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTAYTYTMTKAYM
--NTTTTATTACN
A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C
A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTAYTYTMTKAYM
---TTTTATTGC-
A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T

PH0038.1_Hlx/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTAYTYTMTKAYM-
TGTAATTAATTATGG
A C G T A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C A C G T
C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTAYTYTMTKAYM--
NTNAATTTTATTGNATT
A C G T A C G T A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTAYTYTMTKAYM
--NTTTTACGAC-
A C T G A C G T C G T A A G T C C G A T A G C T A C G T G T A C A G C T A C G T C G T A A G T C G T A C
A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T