Information for 2-TMCGAKATGT (Motif 4)

A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T
Reverse Opposite:
C G T A A G T C C G T A A C G T G T C A A C G T A G T C A C T G A C G T C G T A
p-value:1e-10
log p-value:-2.318e+01
Information Content per bp:1.854
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.1 +/- 25.0bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TMCGAKATGT--
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TMCGAKATGT---
ATTTACGACAAATAGC
 A C G T A C G T A C G T A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TMCGAKATGT
--CCATATGT
 A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

GATA5/MA0766.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TMCGAKATGT
--AGATAAGA
 A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T
A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TMCGAKATGT
NVAGATAAGR
 A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TMCGAKATGT
CATACAATACGAAATAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TMCGAKATGT
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TMCGAKATGT-
-ACCATATGTT
 A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T A C G T
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TMCGAKATGT-
-ACCATATGGT
 A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T A C G T
A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TMCGAKATGT--
--NNATAAGGNN
 A C G T G T C A A G T C A C T G C G T A A C G T C G T A C G A T A C T G C G A T A C G T A C G T
A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T