Information for 12-ATTGATCAGG (Motif 34)

C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
Reverse Opposite:
A T G C G A T C A C G T T A C G T C G A A C G T T G A C T G C A G T C A G C A T
p-value:1e-5
log p-value:-1.183e+01
Information Content per bp:1.702
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif4.33%
Number of Background Sequences with motif481.9
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets48.8 +/- 22.8bp
Average Position of motif in Background50.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX1/MA0754.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--ATTGATCAGG
NTATCGATTA--
 A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATTGATCAGG
TTATCGATTA--
 A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ATTGATCAGG
NTATYGATCH--
 A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATTGATCAGG
ATTGATTYND
 C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATTGATCAGG
TCATCAATCA--
 A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATTGATCAGG
RGCCATYAATCA--
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATTGATCAGG---
ACCGGTTGATCACCTGA
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTGATCAGG
TAATTGATTA--
 A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTGATCAGG
GYCATCMATCAT-
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ATTGATCAGG
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G T G C A A G C T A T G C C G T A C T A G T A C G
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C