Information for 9-GTCCGTTTCCACGGTG (Motif 24)

A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A C T G A G C T A C T G A C T G C G T A C G T A C G T A A G T C A C T G A C T G C G T A G T A C
p-value:1e-7
log p-value:-1.679e+01
Information Content per bp:1.931
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 27.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCCGTTTCCACGGTG
NTNNCGTATCCAAGTNN
 A C G T A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCCGTTTCCACGGTG
-NNCGTTGCTATGGNN
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTCCGTTTCCACGGTG--
----GTTGCCATGGNAAC
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTCCGTTTCCACGGTG
----TTTTCCA-----
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCCGTTTCCACGGTG
---ATTTTCCATT---
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCCGTTTCCACGGTG
---ATTTTCCATT---
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTCCGTTTCCACGGTG
---ATTTTCCATT---
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTCCGTTTCCACGGTG
---ATTTTCCATT---
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTCCGTTTCCACGGTG-
---NGTTGCCATGGCAA
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G A C G T
A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTCCGTTTCCACGGTG
--CTGTTGCTAGGS--
 A C T G A C G T A G T C A G T C C T A G A C G T A C G T A C G T A G T C A G T C C T G A G T A C A C T G C T A G A C G T A C T G
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T