Information for 9-GTTAATACGGGGT (Motif 21)

A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T
Reverse Opposite:
C G T A A G T C A T G C A G T C A G T C A C T G A G C T C G T A A C G T A C G T C G T A C G T A A G T C
p-value:1e-7
log p-value:-1.679e+01
Information Content per bp:1.952
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 26.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTTAATACGGGGT
TGATTGTTAACAGTTGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTAATACGGGGT---
NNNNATGCGGGTNNNN
 A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTTAATACGGGGT
-TTAATCCG----
 A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTTAATACGGGGT
-TTAATCCT----
 A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTTAATACGGGGT--
CATACAATACGAAATAA
 A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTTAATACGGGGT---
TGCGCATAGGGGAGGAG
 A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTTAATACGGGGT
---TATGCGGGTA
 A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

ZNF410/MA0752.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATACGGGGT---
GANTATTATGGGATGGA
 A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T A C G T A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

ELF3/MA0640.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTTAATACGGGGT-
-TTACTTCCGGGTT
 A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T A C G T
A C G T G A C T G A C T C T G A G A T C C G A T A C G T T G A C A G T C A C T G A T C G A T C G C G A T C G A T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTTAATACGGGGT
-TTAATCCC----
 A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C A C T G A C T G A T C G C T A G A C G T
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T