Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-48 | -1.116e+02 | 0.0000 | 73.0 | 7.79% | 331.6 | 0.74% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-33 | -7.697e+01 | 0.0000 | 92.0 | 9.82% | 927.1 | 2.06% | motif file (matrix) |
svg |
3 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.431e+01 | 0.0001 | 92.0 | 9.82% | 2590.5 | 5.75% | motif file (matrix) |
svg |
4 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-6 | -1.395e+01 | 0.0001 | 17.0 | 1.81% | 190.7 | 0.42% | motif file (matrix) |
svg |
5 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.327e+01 | 0.0001 | 117.0 | 12.49% | 3618.3 | 8.03% | motif file (matrix) |
svg |
6 |
| NFY(CCAAT)/Promoter/Homer | 1e-5 | -1.322e+01 | 0.0001 | 62.0 | 6.62% | 1568.8 | 3.48% | motif file (matrix) |
svg |
7 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-5 | -1.318e+01 | 0.0001 | 87.0 | 9.28% | 2475.9 | 5.49% | motif file (matrix) |
svg |
8 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.228e+01 | 0.0002 | 99.0 | 10.57% | 2992.7 | 6.64% | motif file (matrix) |
svg |
9 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-5 | -1.222e+01 | 0.0002 | 114.0 | 12.17% | 3582.1 | 7.95% | motif file (matrix) |
svg |
10 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.167e+01 | 0.0003 | 104.0 | 11.10% | 3233.1 | 7.17% | motif file (matrix) |
svg |
11 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.149e+01 | 0.0003 | 87.0 | 9.28% | 2588.4 | 5.74% | motif file (matrix) |
svg |
12 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-4 | -1.107e+01 | 0.0005 | 58.0 | 6.19% | 1539.3 | 3.41% | motif file (matrix) |
svg |
13 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-4 | -1.095e+01 | 0.0005 | 34.0 | 3.63% | 729.4 | 1.62% | motif file (matrix) |
svg |
14 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.080e+01 | 0.0005 | 43.0 | 4.59% | 1030.4 | 2.29% | motif file (matrix) |
svg |
15 |
| Sp1(Zf)/Promoter/Homer | 1e-4 | -1.077e+01 | 0.0005 | 88.0 | 9.39% | 2679.9 | 5.94% | motif file (matrix) |
svg |
16 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.037e+01 | 0.0007 | 71.0 | 7.58% | 2059.6 | 4.57% | motif file (matrix) |
svg |
17 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-4 | -9.897e+00 | 0.0011 | 52.0 | 5.55% | 1389.8 | 3.08% | motif file (matrix) |
svg |
18 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-4 | -9.673e+00 | 0.0013 | 17.0 | 1.81% | 266.9 | 0.59% | motif file (matrix) |
svg |
19 |
| E-box(bHLH)/Promoter/Homer | 1e-4 | -9.568e+00 | 0.0013 | 22.0 | 2.35% | 408.8 | 0.91% | motif file (matrix) |
svg |
20 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -9.513e+00 | 0.0013 | 82.0 | 8.75% | 2542.4 | 5.64% | motif file (matrix) |
svg |
21 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-4 | -9.465e+00 | 0.0013 | 57.0 | 6.08% | 1596.8 | 3.54% | motif file (matrix) |
svg |
22 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.372e+00 | 0.0014 | 76.0 | 8.11% | 2320.8 | 5.15% | motif file (matrix) |
svg |
23 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-3 | -9.031e+00 | 0.0019 | 77.0 | 8.22% | 2385.6 | 5.29% | motif file (matrix) |
svg |
24 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -8.746e+00 | 0.0024 | 161.0 | 17.18% | 5870.9 | 13.02% | motif file (matrix) |
svg |
25 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-3 | -8.607e+00 | 0.0027 | 11.0 | 1.17% | 137.8 | 0.31% | motif file (matrix) |
svg |
26 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -8.582e+00 | 0.0027 | 50.0 | 5.34% | 1393.6 | 3.09% | motif file (matrix) |
svg |
27 |
| GFY(?)/Promoter/Homer | 1e-3 | -8.191e+00 | 0.0037 | 16.0 | 1.71% | 274.6 | 0.61% | motif file (matrix) |
svg |
28 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-3 | -8.040e+00 | 0.0042 | 14.0 | 1.49% | 223.1 | 0.49% | motif file (matrix) |
svg |
29 |
| PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer | 1e-3 | -7.937e+00 | 0.0045 | 8.0 | 0.85% | 81.3 | 0.18% | motif file (matrix) |
svg |
30 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.832e+00 | 0.0048 | 47.0 | 5.02% | 1329.1 | 2.95% | motif file (matrix) |
svg |
31 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.631e+00 | 0.0057 | 233.0 | 24.87% | 9184.1 | 20.37% | motif file (matrix) |
svg |
32 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-3 | -7.583e+00 | 0.0058 | 70.0 | 7.47% | 2229.0 | 4.94% | motif file (matrix) |
svg |
33 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -7.302e+00 | 0.0074 | 172.0 | 18.36% | 6538.5 | 14.50% | motif file (matrix) |
svg |
34 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.265e+00 | 0.0075 | 15.0 | 1.60% | 270.6 | 0.60% | motif file (matrix) |
svg |
35 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -6.979e+00 | 0.0097 | 22.0 | 2.35% | 495.2 | 1.10% | motif file (matrix) |
svg |
36 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-3 | -6.931e+00 | 0.0099 | 27.0 | 2.88% | 664.3 | 1.47% | motif file (matrix) |
svg |
37 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -6.867e+00 | 0.0102 | 58.0 | 6.19% | 1816.3 | 4.03% | motif file (matrix) |
svg |
38 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.774e+00 | 0.0109 | 189.0 | 20.17% | 7365.8 | 16.34% | motif file (matrix) |
svg |
39 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.743e+00 | 0.0110 | 5.0 | 0.53% | 37.2 | 0.08% | motif file (matrix) |
svg |
40 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.671e+00 | 0.0115 | 28.0 | 2.99% | 711.9 | 1.58% | motif file (matrix) |
svg |
41 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -6.623e+00 | 0.0118 | 20.0 | 2.13% | 444.3 | 0.99% | motif file (matrix) |
svg |
42 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -6.623e+00 | 0.0118 | 12.0 | 1.28% | 202.8 | 0.45% | motif file (matrix) |
svg |
43 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -6.606e+00 | 0.0118 | 113.0 | 12.06% | 4093.9 | 9.08% | motif file (matrix) |
svg |
44 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -6.574e+00 | 0.0118 | 69.0 | 7.36% | 2277.1 | 5.05% | motif file (matrix) |
svg |
45 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -6.455e+00 | 0.0127 | 33.0 | 3.52% | 900.5 | 2.00% | motif file (matrix) |
svg |
46 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -6.443e+00 | 0.0127 | 14.0 | 1.49% | 264.8 | 0.59% | motif file (matrix) |
svg |
47 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -6.341e+00 | 0.0137 | 14.0 | 1.49% | 267.7 | 0.59% | motif file (matrix) |
svg |
48 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.303e+00 | 0.0139 | 42.0 | 4.48% | 1243.2 | 2.76% | motif file (matrix) |
svg |
49 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.268e+00 | 0.0141 | 114.0 | 12.17% | 4178.6 | 9.27% | motif file (matrix) |
svg |
50 |
| CRE(bZIP)/Promoter/Homer | 1e-2 | -6.102e+00 | 0.0163 | 31.0 | 3.31% | 848.4 | 1.88% | motif file (matrix) |
svg |
51 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.043e+00 | 0.0169 | 49.0 | 5.23% | 1531.1 | 3.40% | motif file (matrix) |
svg |
52 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.840e+00 | 0.0204 | 143.0 | 15.26% | 5489.0 | 12.18% | motif file (matrix) |
svg |
53 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.740e+00 | 0.0221 | 23.0 | 2.45% | 583.9 | 1.30% | motif file (matrix) |
svg |
54 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.535e+00 | 0.0266 | 18.0 | 1.92% | 422.1 | 0.94% | motif file (matrix) |
svg |
55 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.486e+00 | 0.0274 | 21.0 | 2.24% | 526.8 | 1.17% | motif file (matrix) |
svg |
56 |
| PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.221e+00 | 0.0351 | 13.0 | 1.39% | 272.8 | 0.61% | motif file (matrix) |
svg |
57 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.214e+00 | 0.0351 | 11.0 | 1.17% | 211.9 | 0.47% | motif file (matrix) |
svg |
58 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.196e+00 | 0.0351 | 66.0 | 7.04% | 2292.5 | 5.09% | motif file (matrix) |
svg |
59 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -5.162e+00 | 0.0354 | 10.0 | 1.07% | 183.8 | 0.41% | motif file (matrix) |
svg |
60 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.157e+00 | 0.0354 | 42.0 | 4.48% | 1329.2 | 2.95% | motif file (matrix) |
svg |
61 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.017e+00 | 0.0395 | 16.0 | 1.71% | 377.2 | 0.84% | motif file (matrix) |
svg |
62 |
| KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.952e+00 | 0.0415 | 51.0 | 5.44% | 1705.8 | 3.78% | motif file (matrix) |
svg |
63 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.785e+00 | 0.0483 | 75.0 | 8.00% | 2714.5 | 6.02% | motif file (matrix) |
svg |
64 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-2 | -4.708e+00 | 0.0513 | 64.0 | 6.83% | 2263.2 | 5.02% | motif file (matrix) |
svg |
65 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -4.632e+00 | 0.0545 | 20.0 | 2.13% | 534.4 | 1.19% | motif file (matrix) |
svg |