Information for 5-CGCAAGGCAGAAGSAA (Motif 7)

A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
Reverse Opposite:
G A C T C G A T A T G C A G T C A C G T A C G T A G T C A C G T A T C G A G T C A G T C A G C T A C G T A C T G A G T C A C T G
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.793
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.8 +/- 18.2bp
Average Position of motif in Background39.6 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CGCAAGGCAGAAGSAA
--------NGAAGC--
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGCAAGGCAGAAGSAA
-AAAAAGCGGAAGTA-
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CGCAAGGCAGAAGSAA
------CCAGACRSVB
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGCAAGGCAGAAGSAA
-----AACAGATGGT-
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGCAAGGCAGAAGSAA
---ATGCCAGACN---
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CGCAAGGCAGAAGSAA
-----AACAGATGGC-
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CGCAAGGCAGAAGSAA---
--AAGGCCAGATGGTCCGG
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CGCAAGGCAGAAGSAA--
---ADGGYAGYAGCATCT
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CGCAAGGCAGAAGSAA
------CCAGACAG--
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CGCAAGGCAGAAGSAA
-AAAAAGAGGAAGTA-
 A G T C T C A G G T A C C G T A T C G A C T A G A C T G A T G C G T C A A C T G C G T A G T C A A C T G A T C G C G T A C G T A
A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T