Information for 3-TTTMCGTTCC (Motif 5)

C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C
Reverse Opposite:
C T A G T C A G C T G A T C G A T G A C C A T G A C G T T C G A C T G A G T C A
p-value:1e-12
log p-value:-2.844e+01
Information Content per bp:1.667
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif6.94%
Number of Background Sequences with motif1123.8
Percentage of Background Sequences with motif2.49%
Average Position of motif in Targets52.6 +/- 27.8bp
Average Position of motif in Background50.0 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TTTMCGTTCC-
-TKCTGTTCCA
 C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TTTMCGTTCC
AGTTTCAKTTTC
 A C G T A C G T C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTMCGTTCC
ASTTTCACTTCC
 A C G T A C G T C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTMCGTTCC
ASTTTCASTTYC
 A C G T A C G T C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTMCGTTCC-
GTTTCACTTCCG
 A C G T C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C A C G T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TTTMCGTTCC-
TCAGTTTCATTTTCC
 A C G T A C G T A C G T A C G T C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTMCGTTCC
ACTTTCACTTTC
 A C G T A C G T C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTMCGTTCC
AGTTTCAGTTTC
 A C G T A C G T C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTMCGTTCC
RSTTTCRSTTTC
 A C G T A C G T C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TTTMCGTTCC---
------TTCCTCT
 C A G T A G C T A G C T T G C A G T A C A C T G A G C T A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T