Information for 13-CCCATATATG (Motif 32)

A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G
Reverse Opposite:
A G T C C G T A C A G T G C T A A C G T C G T A A C G T A C T G A C T G C T A G
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.863
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.9 +/- 25.3bp
Average Position of motif in Background53.9 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CCCATATATG----
TGACCATATATGGTCA
 A C G T A C G T A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:CCCATATATG---
-CCATATATGGNA
 A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G A C G T A C G T A C G T
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCCATATATG---
TTCCATATATGGAA
 A C G T A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G A C G T A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CCCATATATG-
-CCATATATGG
 A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G A C G T
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CCCATATATG--
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCATATATG
ACCATATGTT
 A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCCATATATG
-CCATATGT-
 A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCATATATG-----
CCGATTTAAGCGACC
 A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCATATATG
CCYMATAAAA-
 A C G T A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCATATATG
AACCTTATAT-
 A C G T A G T C A G T C A G T C C G T A C G A T C G T A C A G T G T C A C G A T A C T G
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T