Information for 11-GGCCACGTGATTCTCC (Motif 31)

A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G C G T A C G T A A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.8 +/- 26.3bp
Average Position of motif in Background67.3 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGCCACGTGATTCTCC
-KCCACGTGAC-----
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCCACGTGATTCTCC
GGTCACGTGA------
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGCCACGTGATTCTCC
-GCCACGTGT------
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGCCACGTGATTCTCC
-GCCACGTG-------
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGCCACGTGATTCTCC
CCGGTCACGTGA------
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGCCACGTGATTCTCC
--NCACGTGACN----
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCCACGTGATTCTCC
-ACCACGTGAC-----
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCCACGTGATTCTCC
-ACCACGTGCTC----
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCCACGTGATTCTCC
-NCCACGTG-------
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCCACGTGATTCTCC
-GTCACGTGAT-----
 A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A G T C A G T C
A C G T T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T