Information for 8-CTACCCAGCAGGG (Motif 17)

A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G
Reverse Opposite:
A T G C G T A C A G T C A C G T A C T G A T G C A C G T A C T G A C T G C T A G A G C T C G T A A C T G
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.824
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.0 +/- 33.7bp
Average Position of motif in Background47.3 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CTACCCAGCAGGG--
---CACAGCAGGGGG
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CTACCCAGCAGGG--
CCACACAGCAGGAGA
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CTACCCAGCAGGG--
CCACACAGCAGGAGA
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTACCCAGCAGGG----
--DCHCAGCAGGRGGCC
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTACCCAGCAGGG
--DCTCAGCAGG-
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTACCCAGCAGGG--
GAGCACAGCAGGACA
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTACCCAGCAGGG-
ATTTCCCAGVAKSCY
 A C G T A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTACCCAGCAGGG----
---CACAGCGGGGGGTC
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTACCCAGCAGGG----------
---GCCASCAGGGGGCGCYVNNG
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTACCCAGCAGGG-------
-TGGCCACCAGGGGGCGCTA
 A G T C G A C T C T G A A G T C A G T C A G T C C G T A A T C G A G T C C G T A C T A G A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A