Information for 8-CCGTCAVTCACWGCCC (Motif 16)

G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
Reverse Opposite:
T A C G C T A G T A C G T G A C G C A T A T C G C G A T C T A G T C G A A C G T C G A T A T C G C T G A A G T C T A C G A C T G
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.691
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif24.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.6 +/- 19.6bp
Average Position of motif in Background41.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCGTCAVTCACWGCCC
----AAATCACTGC--
 G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCGTCAVTCACWGCCC
----AAATCACAGCA-
 G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGTCAVTCACWGCCC
SCTGTCAVTCAV-----
 A C G T G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGTCAVTCACWGCCC
NCTGTCAATCAN-----
 A C G T G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCGTCAVTCACWGCCC
GSCTGTCACTCA------
 A C G T A C G T G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGTCAVTCACWGCCC
TCATCAATCA------
 G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCGTCAVTCACWGCCC---
---TGACCCAGTGACCTAC
 G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CCGTCAVTCACWGCCC
--------CACAGN--
 G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCGTCAVTCACWGCCC----
----CAATCACTGGCAGAAT
 G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCGTCAVTCACWGCCC
GCCATAAATCA------
 A C G T G T A C A T G C T C A G A G C T T A G C G C T A T G C A A G C T A G T C C G T A A T G C C G T A A C T G A T G C A G T C A T G C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T