Information for 6-CCTCTGCAGKGMC (Motif 7)

A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C G T A C A G T C A C G T A C T G A G T C C T G A A C T G G T C A A C T G A C T G
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.916
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.9 +/- 26.6bp
Average Position of motif in Background47.0 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTGCAGKGMC---
NNNANTGCAGTGCNNTT
 A C G T A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCTCTGCAGKGMC
-CACAGCAGGGGG
 A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCAGKGMC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCAGKGMC
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCAGKGMC
GACCCCCCGCTGTG--
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCAGKGMC
DCTCAGCAGG---
 A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCAGKGMC
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-9
Orientation:forward strand
Alignment:---------CCTCTGCAGKGMC
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCAGKGMC
CCTTTGAWGT---
 A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTGCAGKGMC
NSCACTYVAV----
 A C G T A G T C A G T C A C G T A G T C A G C T A C T G A G T C C G T A A C T G C A T G A C T G G T C A A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T