Information for 5-GCTTTTTGGGACTCTG (Motif 6)

A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C T G A A C T G C G A T A T G C A G T C G T A C C G T A C G T A G C T A C G T A C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.652e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 32.1bp
Average Position of motif in Background27.6 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTTTGGGACTCTG
RGSMTBCTGGGAAAT--
 A C G T A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCTTTTTGGGACTCTG
---NNTTGGCANN---
 A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCTTTTTGGGACTCTG
CAATGCATTGTGGGTA----
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCTTTTTGGGACTCTG---
---NNATTGGACTTTNGNN
 A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GCTTTTTGGGACTCTG
--NTTTTACGACT---
 A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GCTTTTTGGGACTCTG-------
-------TGGACTTTGNNCTNTG
 A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GCTTTTTGGGACTCTG---
-----TTGGCATGGTGCCA
 A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GCTTTTTGGGACTCTG------
-------TGGACTTTGNNCTCN
 A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

BCL6B/MA0731.1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GCTTTTTGGGACTCTG
TGCTTTCTAGGAATTCA
 A C G T A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTTTGGGACTCTG
ANNATTTTACGACNTNA
 A C G T A C T G A G T C A C G T A C G T C A G T A C G T A C G T A C T G A C T G A T C G C G T A A G T C A G C T G T A C A C G T A C T G
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A