Information for 4-AACTCAGGTCTGCCCC (Motif 5)

C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
C T A G C T A G A C T G A C T G A G T C C G T A A C T G G T C A A G T C G T A C A C G T A C T G G C T A A C T G A C G T A C G T
p-value:1e-13
log p-value:-3.066e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.5 +/- 12.3bp
Average Position of motif in Background22.5 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AACTCAGGTCTGCCCC--
----NAGCCCCGCCCCCN
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AACTCAGGTCTGCCCC-----
-----ATCCCCGCCCCTAAAA
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.53
Offset:9
Orientation:forward strand
Alignment:AACTCAGGTCTGCCCC--
---------CTGCCCGCA
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AACTCAGGTCTGCCCC-----
-----GGGTGTGCCCAAAAGG
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AACTCAGGTCTGCCCC--
------TGTCTGDCACCT
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AACTCAGGTCTGCCCC
----CAGGTGAGG---
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AACTCAGGTCTGCCCC
---VBSYGTCTGG---
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.49
Offset:5
Orientation:forward strand
Alignment:AACTCAGGTCTGCCCC--
-----CTGTCTGTCACCT
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.49
Offset:9
Orientation:forward strand
Alignment:AACTCAGGTCTGCCCC--
---------ATGCCCACC
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AACTCAGGTCTGCCCC-----
----TCACCCCGCCCCAAATT
 C G T A C G T A G T A C C G A T A G T C C G T A A C T G C T A G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T