Information for 3-AGAGGGCGCTGTTGKS (Motif 3)

C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
Reverse Opposite:
T A C G T G A C G T A C C T G A C T G A A G T C C G T A A T C G A T G C A C T G A G T C A G T C G A T C A G C T A G T C A C G T
p-value:1e-23
log p-value:-5.526e+01
Information Content per bp:1.802
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 17.5bp
Average Position of motif in Background25.3 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGCGCTGTTGKS
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGGCGCTGTTGKS
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAGGGCGCTGTTGKS
AGGGGGCGGGGCTG--
 C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAGGGCGCTGTTGKS
RGKGGGCGGAGC----
 C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------AGAGGGCGCTGTTGKS
TGGCCACCAGGGGGCGCTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------AGAGGGCGCTGTTGKS
TGGCCACCAGGTGGCACTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAGGGCGCTGTTGKS
AGTGGGCGTGGC----
 C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGGCGCTGTTGKS
NAAGGGGGCGTGGCTTN-
 A C G T A C G T C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTGTTGKS
AAGGGGGCGTGGCC---
 A C G T C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTGTTGKS
NNAGGGGCGGGGTNNA-
 A C G T C G T A A C T G C T G A C T A G A C T G A C T G G T A C A T C G A T G C A C G T A C T G A G C T G A C T A C T G A C T G A T G C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T