Information for 13-AGATAGAGGG (Motif 16)

C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A G T C A C G T C G T A A C G T A G T C A C G T
p-value:1e-5
log p-value:-1.285e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 18.4bp
Average Position of motif in Background31.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGATAGAGGG----
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGATAGAGGG
AGATAASR--
 C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGATAGAGGG
AGATAAGA--
 C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGATAGAGGG
AGATAAGA--
 C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGATAGAGGG
ANAGATAAGAA-
 A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGATAGAGGG--
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGATAGAGGG-
ATGATKGATGRC
 A C G T C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGATAGAGGG
NNGAGATAAGA--
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGATAGAGGG
NAGATAAGNN-
 A C G T C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGATAGAGGG
DCYAAAAATAGM---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G C G T A A C T G A C T G A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T