Information for 6-GCTAATTTTTGTCACT (Motif 10)

A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T
Reverse Opposite:
C T G A A T C G C G A T A C T G C G T A G T A C C G T A T C G A C T G A G T C A T C G A G A C T A C G T C G T A C A T G G T A C
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.678
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.3 +/- 21.9bp
Average Position of motif in Background54.7 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTAATTTTTGTCACT
--TAATTGTTCTAAAC
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T
A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCTAATTTTTGTCACT--
----TTTTTTTTCNNGTN
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTAATTTTTGTCACT
TTCAATTGTTCTAAAA
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTAATTTTTGTCACT-
--ANATTTTTGCAANTN
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T A C G T
A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCTAATTTTTGTCACT
-----NTTTTATGAC-
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCTAATTTTTGTCACT--
---NNTTTNTTTTNGNNN
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTAATTTTTGTCACT--
--NGANTTTTATGGCTCN
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T A C G T A C G T
A C G T A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCTAATTTTTGTCACT---
---NAATTTTATTACCNNN
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCTAATTTTTGTCACT
----ACTTTCGTTTCT
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T
A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTAATTTTTGTCACT--
-NNNNTTTTTTTTTNAAC
 A C T G G A T C G C A T T G C A C G T A A G C T A C G T A G C T A C G T C G A T A C T G A C G T G T A C G C T A T A G C G A C T A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C