Information for 7-GCTCGGTCCGAGGTCC (Motif 14)

A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C T G C G T A A T G C A G T C A C T G G T C A A C T G T G A C
p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.922
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 25.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTCGGTCCGAGGTCC----
GGCGCTGTCCATGGTGCTGAA
 A C G T A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTCGGTCCGAGGTCC
-AGGGGTCAGAGGTCA
 A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTCGGTCCGAGGTCC---
GGAGCTGTCCATGGTGCTGA
 A C G T A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCTCGGTCCGAGGTCC
--GAGGTCAAAGGTCA
 A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTCGGTCCGAGGTCC
--GAGGTCAAAGGTCA
 A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C
A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTCGGTCCGAGGTCC
--GGGGTCAAAGGTCA
 A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTCGGTCCGAGGTCC
--GGGGTCAAAGGTCA
 A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C
A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTCGGTCCGAGGTCC
--GGGGTCAAAGGTCA
 A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCTCGGTCCGAGGTCC
----GCTCCG------
 A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GCTCGGTCCGAGGTCC-
-------CAAAGGTCAG
 A C T G A G T C A C G T A G T C A C T G A T C G A C G T A G T C A G T C A C T G C G T A A C T G A C T G G C A T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G