Information for 4-CAGAAGGAGAAGT (Motif 9)

A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T
Reverse Opposite:
G C T A A G T C A C G T A C G T A G T C C G A T A G T C A G T C C G A T A C G T A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 27.6bp
Average Position of motif in Background53.5 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CAGAAGGAGAAGT-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGAAGGAGAAGT-
AAAAAGCGGAAGTA
 A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGAAGGAGAAGT--
-TTAAGAGGAAGTTA
 A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T A C G T A C G T
A C G T A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

SPIC/MA0687.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGAAGGAGAAGT-
AAAAAGAGGAAGTA
 A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGAAGGAGAAGT-
--AAAGRGGAAGTG
 A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T A C G T
A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGGAGAAGT
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGGAGAAGT
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAGGAGAAGT
AACAGATGGT-----
 A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAGGAGAAGT
AACAGATGGC-----
 A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGAAGGAGAAGT
CACAGCAGGGGG---
 A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C T G C A G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T