Information for 2-CAAGAAGCAACAA (Motif 6)

G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A
Reverse Opposite:
C G A T A G C T A C T G A C G T A C G T A C T G A T G C A C G T C G A T A G T C A C G T A C G T C A T G
p-value:1e-13
log p-value:-3.218e+01
Information Content per bp:1.807
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.6 +/- 19.7bp
Average Position of motif in Background42.6 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAGAAGCAACAA---
-AACAAACAACAAGAG
 G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAGAAGCAACAA--
CAAACAACAACACCT
 G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAAGAAGCAACAA--
---AAACAAACATTC
 G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAAGAAGCAACAA----
--AAAAATAACAAACGG
 G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CAAGAAGCAACAA-
--------AACAAT
 G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CAAGAAGCAACAA---
------RNAACAATGG
 G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAAGAAGCAACAA-
TGCCAAAATAAACANN
 A C G T A C G T G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAAGAAGCAACAA-
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CAAGAAGCAACAA-
-------NAACAAT
 G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAGAAGCAACAA---
-ATGTCACAACAACAC
 G A T C C G T A C G T A T C A G C G T A G T C A T A C G T G A C G T C A C G T A A G T C C T G A C G T A A C G T A C G T A C G T
A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C