Information for 9-AATKATTCHT (Motif 16)

G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
Reverse Opposite:
C T G A C T G A C T A G C G T A G T C A A C G T G T C A G T C A A G C T A C G T
p-value:1e-5
log p-value:-1.297e+01
Information Content per bp:1.700
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif173.2
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets55.6 +/- 28.8bp
Average Position of motif in Background50.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AATKATTCHT
AATTATT---
 G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AATKATTCHT
TGAATTATGCAT
 A C G T A C G T G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATKATTCHT
-ATGAGTCAT
 G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

Dlx2/MA0885.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATKATTCHT
GCAATTAA----
 A C G T A C G T G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATKATTCHT
CTAATTAA----
 A C G T A C G T G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATKATTCHT
CCAATTAA----
 A C G T A C G T G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AATKATTCHT-
CATGACTCATC
 G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T A C G T
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

EN1/MA0027.2/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATKATTCHT
CTAATTAG----
 A C G T A C G T G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATKATTCHT
TTAATTAA----
 A C G T A C G T G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AATKATTCHT
GCCAATTAAC---
 A C G T A C G T A C G T G T C A C T G A A C G T C A G T T C G A C A G T C G A T G A T C G A C T A G C T
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T A C G T A C G T