Information for 9-TCAGGATTCA (Motif 9)

C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A
Reverse Opposite:
A G C T A T C G C G T A T C G A A C G T A T G C A G T C A C G T A C T G G C T A
p-value:1e-12
log p-value:-2.770e+01
Information Content per bp:1.821
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif175.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets55.7 +/- 27.8bp
Average Position of motif in Background52.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCAGGATTCA
GKVTCADRTTWC-
 A C G T A C G T A C G T C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGATTCA
ANCAGGATGT-
 A C G T C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCAGGATTCA-
-VRGGATTARN
 C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCAGGATTCA
--NGGATTAA
 C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCAGGATTCA-
AANNATCCGGATGTNN
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

Dmbx1/MA0883.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGGATTCA----
TGAACCGGATTAATGAA
 A C G T A C G T A C G T C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGGATTCA----
TGAACCGGATTAATGAA
 A C G T A C G T A C G T C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCAGGATTCA-----
TGAAGGGATTAATCATC
 A C G T A C G T C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCAGGATTCA
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCAGGATTCA---
TATCATAATTAAGGA
 A C G T A C G T C G A T A G T C C G T A C T A G A T C G T G C A A G C T C G A T A T G C T C G A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A