Information for 12-CGTGATAGCA (Motif 13)

A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C G A C T C G T A A C G T A G T C C G T A G T A C A T C G
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.895
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.9 +/- 22.9bp
Average Position of motif in Background43.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGTGATAGCA---
-GGGATTGCATNN
 A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGTGATAGCA
-TTGATTGN-
 A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGTGATAGCA
NCACGTGACN---
 A C G T A C G T A C G T A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGTGATAGCA
NCGTGACN---
 A C G T A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGTGATAGCA----
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

MLX/MA0663.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTGATAGCA
ATCACGTGAT----
 A C G T A C G T A C G T A C G T A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGTGATAGCA
GTCACGTGAT----
 A C G T A C G T A C G T A C G T A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTGATAGCA
GTTAATGGCC
 A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

PH0014.1_Cphx/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGTGATAGCA-----
-ATGATCGAATCAAA
 A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTGATAGCA---
-ATGACGTCAYYN
 A T G C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G