Information for 7-CGCCGCTCCCTBAGAA (Motif 20)

A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T T G A C C G T A C T A G A C T G A T C G C G T A A C T G A G T C A C T G A C T G A G T C C T A G
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.878
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 25.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCCGCTCCCTBAGAA--
---CATTTCCTGAGAAAT
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CGCCGCTCCCTBAGAA
------TTCCKNAGAA
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCCGCTCCCTBAGAA
-GCCMCRCCCH-----
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCCGCTCCCTBAGAA
-GCCCCGCCCC-----
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGCCGCTCCCTBAGAA
----GCTGASTCAGCA
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
A C G T A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGCCGCTCCCTBAGAA
----GCTCCG------
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGCCGCTCCCTBAGAA
-GCCCCACCCA-----
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCCGCTCCCTBAGAA
CGCAGCTGCG------
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGCCGCTCCCTBAGAA
----ANTTCTNNAGAA
 A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGCCGCTCCCTBAGAA
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T G C A G T C A G T C A C G T A C G T C G T A A C T G G T C A C G T A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T