Information for 9-GCGGAGCTAA (Motif 16)

A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
Reverse Opposite:
A C G T A C G T C T G A A C T G G T A C C G A T G T A C G T A C A C T G A G T C
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.854
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif40.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets39.7 +/- 27.7bp
Average Position of motif in Background43.6 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCTAA
-CGGAGC---
 A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCTAA
RGKGGGCGGAGC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCGGAGCTAA
GGGGGCGGGGCC--
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCTAA
AGGGGGCGGGGCTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGAGCTAA
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCTAA--
-NNGAGATAAGA
 A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A A C G T A C G T
A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGAGCTAA
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCGGAGCTAA----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGGAGCTAA
AGCGGAAGTG-
 A C G T A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCGGAGCTAA
TTAAGAGGAAGTTA
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A C A T G A G T C A G C T T G C A G T C A
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C