p-value: | 1e-11 |
log p-value: | -2.618e+01 |
Information Content per bp: | 1.928 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.66% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 26.5 +/- 14.9bp |
Average Position of motif in Background | 46.8 +/- 16.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0072.1_Sox5_1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGAGGGAACAATA---- -TTTAGAACAATAAAAT |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGAGGGAACAATA---- NNNNNGAACAATTGANN |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGAGGGAACAATA----- -TAGTGAACAATAGATTT |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGAGGGAACAATA---- TCACGGAACAATAGGTG |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGAGGGAACAATA---- -TTAAGAACAATAAATT |
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SOX9/MA0077.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGAGGGAACAATA- -----GAACAATGG |
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MF0011.1_HMG_class/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GGAGGGAACAATA ------AACAAT- |
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Sox5/MA0087.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGAGGGAACAATA -----NAACAAT- |
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E2F6/MA0471.1/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGAGGGAACAATA GGGCGGGAAGG--- |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGAGGGAACAATA----- --AATGAACAATGGAATT |
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