Information for 2-TCTGGCTCTG (Motif 7)

A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
Reverse Opposite:
T G A C C T G A T A C G T G C A A T C G G T A C A G T C T C G A T A C G T C G A
p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.484
Number of Target Sequences with motif240.0
Percentage of Target Sequences with motif26.43%
Number of Background Sequences with motif8095.5
Percentage of Background Sequences with motif16.76%
Average Position of motif in Targets50.7 +/- 25.2bp
Average Position of motif in Background50.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCTGGCTCTG----------
YCAGGCWCAGTACCAGGCTC
 A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCTCTG
GGTCTGGCAT--
 A C G T A C G T A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCTCTG
GCTCGGSCTC--
 A C G T A C G T A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGCTCTG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCTCTG
TGTCTGDCACCT
 A C G T A C G T A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCTGGCTCTG
CTGTCTGTCACCT
 A C G T A C G T A C G T A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCTCTG---
NNTCCTGCTGTGNNN
 A C G T A C G T A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGCTCTG
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCTGGCTCTG
CTGTCTGG-----
 A C G T A C G T A C G T A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTGGCTCTG
NTTGGCANN-
 A G C T A T G C A G C T T C A G C A T G T A G C A C G T A T G C G A C T A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T