Information for 1-AATGGCAGACGTT (Motif 3)

C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C T G A C G T A G T C A C G T T A C G A T G C A G T C C G T A A C G T A C G T
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.7 +/- 20.6bp
Average Position of motif in Background52.6 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AATGGCAGACGTT-
----CCAGACRSVB
 C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0131.1_Gmeb1_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AATGGCAGACGTT-----
--TGGGCGACGTCGTTAA
 C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AATGGCAGACGTT-
--NCGCGGACGTTG
 C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATGGCAGACGTT
AGGTGHCAGACA--
 A C G T C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AATGGCAGACGTT
----CCAGACAG-
 C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AATGGCAGACGTT
------TGACGT-
 C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AATGGCAGACGTT-
-CATCCAGATGTTC
 C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATGGCAGACGTT---
CAAATCCAGACATCACA
 A C G T C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AATGGCAGACGTT
---TCCAGATGTT
 C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AATGGCAGACGTT
-ATGCCAGACN--
 C G T A T C G A G C A T C T A G A T C G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T