Information for 13-TARCTAATATTAR (Motif 19)

A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G
Reverse Opposite:
G A T C A C G T C G T A C G T A A C G T C G T A A C G T A C G T C T G A A C T G A G C T A C G T G T C A
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.857
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.4 +/- 27.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:TARCTAATATTAR----
---CTAATATTGCTAAA
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:TARCTAATATTAR----
---CTAATATTGCTAAA
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TARCTAATATTAR----
------ATATTAATTAA
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TARCTAATATTAR-
--GCTATAAATAGC
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T
A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TARCTAATATTAR--
-AAAAACCATTAAGG
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T A C G T
A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TARCTAATATTAR-
--TCTAAAAATAGA
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T
A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TARCTAATATTAR-
--GCTAAAAATAGC
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T
A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TARCTAATATTAR-
--ACTATAAATAGA
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T
A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TARCTAATATTAR
AAACAAACATTC-
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TARCTAATATTAR------
-----AATATTAATAAAGA
 A C G T C G T A C T G A A G T C G A C T G T C A C G T A A C G T C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A