Information for 4-CGGCGGGAGCCAAGGT (Motif 13)

A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
Reverse Opposite:
T G C A A G T C A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T G C A G T C A G T C A C T G A T G C A G T C A T C G
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.853
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.4 +/- 16.6bp
Average Position of motif in Background59.7 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGCGGGAGCCAAGGT
GGGCGGGACC------
 A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGCGGGAGCCAAGGT
GGGCGGGAAGG-----
 A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGCGGGAGCCAAGGT
GGGCGGGAAGG-----
 A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGGCGGGAGCCAAGGT
-GGCGGGAARN-----
 A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGCGGGAGCCAAGGT
BTKGGCGGGAAA------
 A C G T A C G T A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGGAGCCAAGGT
CWGGCGGGAA-------
 A C G T A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCGGGAGCCAAGGT
TGGCGGGAAAHB----
 A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGCGGGAGCCAAGGT
-GGCGGGAAAH-----
 A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGGCGGGAGCCAAGGT
----CGGAGC------
 A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGGGAGCCAAGGT
NAGANTGGCGGGGNGNA----
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T C G A G T C A C T G A C T G A T C G C G T A A C T G G T A C G T A C T C G A C T G A A C T G A C T G A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T A C G T A C G T