Information for 7-CCCCGGGAGGGAA (Motif 12)

A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A
Reverse Opposite:
C G A T A G C T A G T C A T G C A G T C A C G T A G T C A G T C A G T C A T C G A C T G A C T G A T C G
p-value:1e-10
log p-value:-2.392e+01
Information Content per bp:1.896
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 23.3bp
Average Position of motif in Background59.8 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CCCCGGGAGGGAA
CACCCCCGGGGGGG--
 A C G T A C G T A C G T A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCCCGGGAGGGAA
CCCCCCCGGGGGGGT-
 A C G T A C G T A C G T A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCCCGGGAGGGAA
CCCCCCCGGGGGGGT-
 A C G T A C G T A C G T A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CCCCGGGAGGGAA--
----GGGCGGGAAGG
 A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCCCGGGAGGGAA
---CWGGCGGGAA
 A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A
A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CCCCGGGAGGGAA--
----GGGCGGGAAGG
 A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCCCGGGAGGGAA-
--BTKGGCGGGAAA
 A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CCCCGGGAGGGAA--
-----GGCGGGAARN
 A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCCCGGGAGGGAA---
----TGGCGGGAAAHB
 A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCCGGGAGGGAA---
GTATTGGGTGGGTAATT
 A C G T A T G C A G T C A G T C A T G C A C T G A C T G A C T G G T C A A C T G A T C G A C T G C T G A C G T A A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T