Information for 15-CACGAGAGGG (Motif 19)

A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G
Reverse Opposite:
A T G C A T G C A T G C A C G T A G T C C G A T A G T C A T C G A G C T A C T G
p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.846
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif181.8
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets52.4 +/- 27.9bp
Average Position of motif in Background51.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFE3/MA0831.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CACGAGAGGG
ATCACGTGAC--
 A C G T A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACGAGAGGG
ATCACGTGAC--
 A C G T A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G
T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CACGAGAGGG
NCACGTGACN-
 A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACGAGAGGG
GGCACGTGCC--
 A C G T A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACGAGAGGG
GCACGTGA---
 A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACGAGAGGG
GGTCACGTGG---
 A C G T A C G T A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CACGAGAGGG------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACGAGAGGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CACGAGAGGG-
TCACGTGACCGG
 A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACGAGAGGG
GTCACGTGAN--
 A C G T A C G T A G T C T C G A A T G C A C T G G C T A A C T G G T C A A T C G A T C G A T C G
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T