Information for 12-TGAATATGCA (Motif 15)

C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.924
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.1 +/- 20.7bp
Average Position of motif in Background40.8 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TGAATATGCA----
ATGAATATTCATGAG
 A C G T C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TGAATATGCA-
-GHATATKCAT
 C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGAATATGCA-
-GAATATTCAT
 C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T
A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGAATATGCA--
AYATGYATATGCATR
 A C G T A C G T A C G T C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGAATATGCA------
TNNATTATGCATANNTT
 A C G T C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGAATATGCA---
---ATATGCAAAT
 C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------TGAATATGCA-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGAATATGCA----
--AATATGCAAATT
 C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGAATATGCA---
TTCATTTGCATAT
 C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU4F2/MA0683.1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATATGCA-
CTCATTAATTATGCAT
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G T A A C G T C G T A A C G T A C T G A T G C C G T A A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T