Information for 4-MAWGGTKACWGACASW (Motif 6)

G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
Reverse Opposite:
C G A T A T G C A C G T A T C G A C G T A G T C C G A T A C T G A G C T G T A C C G T A A G T C G T A C C G A T A C G T A C G T
p-value:1e-14
log p-value:-3.343e+01
Information Content per bp:1.836
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 23.3bp
Average Position of motif in Background44.1 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:MAWGGTKACWGACASW
--AGGTGNCAGACAG-
 G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:MAWGGTKACWGACASW
--AGGTGHCAGACA--
 G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:MAWGGTKACWGACASW
----NTGATTGACAGN
 G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:MAWGGTKACWGACASW
----BTGABTGACAGS
 G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:MAWGGTKACWGACASW-
-----TGAGTGACAGSC
 G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.58
Offset:8
Orientation:forward strand
Alignment:MAWGGTKACWGACASW
--------TTGACAG-
 G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----MAWGGTKACWGACASW
ANGNAAAGGTCA--------
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-MAWGGTKACWGACASW
TCAAGGTCAN-------
 A C G T G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MAWGGTKACWGACASW
-AGGGTAACAGC----
 G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:MAWGGTKACWGACASW
-------CCAGACAG-
 G T C A C G T A C G T A A C T G A C T G A C G T A C T G C T G A G T A C C G T A A C T G C G T A A T G C C G T A A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T