Information for 13-GTTATGGTTA (Motif 37)

A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A
Reverse Opposite:
A G C T C G T A C G T A A G T C A G T C C G T A A C G T C G T A C T G A A G T C
p-value:1e-6
log p-value:-1.466e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 19.1bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTTATGGTTA
GCTGTGGTTT
 A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GTTATGGTTA-
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTATGGTTA
NNTGTGGTTT
 A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTTATGGTTA-
-CTGTGGTTTN
 A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTATGGTTA-
NNHTGTGGTTWN
 A C G T A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTTATGGTTA
GTCTGTGGTTT
 A C G T A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTTATGGTTA---
CTATAATTGTTAGCG
 A C G T A C G T A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GTTATGGTTA
---ATTGTTA
 A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTATGGTTA
-TTGCGGTTT
 A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTTATGGTTA-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T C G T A A C G T A C T G A C T G A C G T A C G T C T G A A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T