Information for 4-TTGTGTATTG (Motif 3)

A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G
Reverse Opposite:
T A G C C G T A C G T A A C G T G T C A G A T C C G T A A G T C G T C A T G C A
p-value:1e-21
log p-value:-4.950e+01
Information Content per bp:1.849
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.93%
Number of Background Sequences with motif248.8
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets53.6 +/- 26.6bp
Average Position of motif in Background51.6 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:TTGTGTATTG--
-TGTGGATTNNN
 A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TTGTGTATTG-
NNTGTGGATTSS
 A C G T A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTGTGTATTG
TATTGTTTATT-
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTGTGTATTG
TTGTTTAC--
 A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTGTATTG-
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

FOXG1/MA0613.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGTGTATTG
TTGTTTAC--
 A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTGTGTATTG
-TGTTTATTT
 A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGTATTG---
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGTATTG---
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGTATTG-
CBTGTTTAYAWW
 A C G T A C G T A C G T A C T G A C G T C T A G A C G T G T C A C G A T A C G T A T C G A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T