Information for 15-TTCTGSTGKTAATWAA (Motif 23)

A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A
Reverse Opposite:
A C G T A G C T C G A T T C G A C G A T A C G T G T C A G T C A A T G C G T C A T A G C G T A C G C T A A C T G G T C A C G T A
p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.739
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.6 +/- 22.7bp
Average Position of motif in Background56.6 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTCTGSTGKTAATWAA
---AGGTGTTAAT---
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTCTGSTGKTAATWAA-
---TGGAGGTAATTAAC
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A A C G T
A C G T A C G T A C G T C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C

PH0069.1_Hoxc4/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTCTGSTGKTAATWAA----
---NNTNNTTAATTAATNCG
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G

LMX1A/MA0702.1/Jaspar

Match Rank:4
Score:0.57
Offset:8
Orientation:forward strand
Alignment:TTCTGSTGKTAATWAA
--------TTAATTAA
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A

PH0153.1_Prop1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCTGSTGKTAATWAA----
---GNNTNTTAATTAATNCN
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

PB0001.1_Arid3a_1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTCTGSTGKTAATWAA-----
----GGGTTTAATTAAAATTC
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0136.1_Phox2b/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTCTGSTGKTAATWAA-----
----CNNNTTAATTAATTNNN
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0128.1_Otp/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTCTGSTGKTAATWAA----
---CGTAATTAATTAATTGG
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C A G G A C T C G T A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C A G T C A T G A C T G

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTCTGSTGKTAATWAA----
---NNTTTTTAATTAATTCG
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0051.1_Hoxa4/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTCTGSTGKTAATWAA----
---GATTATTAATTAACTTG
 A C G T A C G T A G T C C A G T A C T G A T C G A C G T A T C G C A G T A C G T C G T A C G T A A G C T G C T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G