Information for 10-TRMAAACWCARCMAGW (Motif 17)

A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T
Reverse Opposite:
C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C T G A G C T C T G A
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.852
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 18.4bp
Average Position of motif in Background26.5 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TRMAAACWCARCMAGW
--AAATCACAGCA---
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TRMAAACWCARCMAGW
--AAATCACTGC----
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TRMAAACWCARCMAGW--
---GAGCACAGCAGGACA
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T A C G T A C G T
A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TRMAAACWCARCMAGW
--AAACCACAGC----
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TRMAAACWCARCMAGW
--AAACCACANN----
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TRMAAACWCARCMAGW
GCAAAACATTACTA--
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TRMAAACWCARCMAGW
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TRMAAACWCARCMAGW--
---CCACACAGCAGGAGA
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TRMAAACWCARCMAGW--
---CCACACAGCAGGAGA
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T A C G T A C G T
A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TRMAAACWCARCMAGW
-----DCTCAGCAGG-
 A G C T C T G A G T A C C G T A G T C A C G T A A G T C C G A T A G T C C G T A C T A G A G T C G T A C C G T A A C T G C G A T
A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T