Information for 10-GKTKYTAATGGRC (Motif 15)

C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C C G T A A C G T A C G T C G T A C T G A G T A C G T C A G T C A A G T C
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 22.6bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GKTKYTAATGGRC
---GTTAATGGCC
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GKTKYTAATGGRC
----CTAATKGV-
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GKTKYTAATGGRC
---GKTAATGR--
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GKTKYTAATGGRC
----NTAATTGN-
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

BSX/MA0876.1/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GKTKYTAATGGRC
----NTAATTGG-
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T

GSX2/MA0893.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GKTKYTAATGGRC
---NTTAATTAGN
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GKTKYTAATGGRC
---NNTAATTANN
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GKTKYTAATGGRC
---GCTAATTGCT
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GKTKYTAATGGRC
----TTAATTAN-
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T

VENTX/MA0724.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GKTKYTAATGGRC
----CTAATCGNT
 C T A G A C G T A C G T A C T G A G C T A C G T C G T A C G T A A C G T A C T G A C T G C T A G A G T C
A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T