Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-97 | -2.239e+02 | 0.0000 | 64.0 | 35.96% | 226.9 | 0.52% | motif file (matrix) |
svg |
2 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-30 | -6.908e+01 | 0.0000 | 41.0 | 23.03% | 886.0 | 2.03% | motif file (matrix) |
svg |
3 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-24 | -5.668e+01 | 0.0000 | 35.0 | 19.66% | 805.8 | 1.85% | motif file (matrix) |
svg |
4 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-23 | -5.519e+01 | 0.0000 | 22.0 | 12.36% | 198.7 | 0.46% | motif file (matrix) |
svg |
5 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-22 | -5.232e+01 | 0.0000 | 30.0 | 16.85% | 601.9 | 1.38% | motif file (matrix) |
svg |
6 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-19 | -4.543e+01 | 0.0000 | 57.0 | 32.02% | 3457.2 | 7.93% | motif file (matrix) |
svg |
7 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-19 | -4.422e+01 | 0.0000 | 22.0 | 12.36% | 333.2 | 0.76% | motif file (matrix) |
svg |
8 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-17 | -4.055e+01 | 0.0000 | 24.0 | 13.48% | 511.0 | 1.17% | motif file (matrix) |
svg |
9 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-15 | -3.679e+01 | 0.0000 | 49.0 | 27.53% | 3102.7 | 7.11% | motif file (matrix) |
svg |
10 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-11 | -2.660e+01 | 0.0000 | 44.0 | 24.72% | 3338.6 | 7.65% | motif file (matrix) |
svg |
11 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-10 | -2.369e+01 | 0.0000 | 28.0 | 15.73% | 1551.2 | 3.56% | motif file (matrix) |
svg |
12 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-8 | -1.916e+01 | 0.0000 | 24.0 | 13.48% | 1416.0 | 3.25% | motif file (matrix) |
svg |
13 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-5 | -1.259e+01 | 0.0001 | 54.0 | 30.34% | 7195.8 | 16.50% | motif file (matrix) |
svg |
14 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-5 | -1.212e+01 | 0.0001 | 22.0 | 12.36% | 1808.6 | 4.15% | motif file (matrix) |
svg |
15 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-3 | -8.695e+00 | 0.0041 | 5.0 | 2.81% | 123.0 | 0.28% | motif file (matrix) |
svg |
16 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -7.684e+00 | 0.0105 | 17.0 | 9.55% | 1648.0 | 3.78% | motif file (matrix) |
svg |
17 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -7.327e+00 | 0.0141 | 18.0 | 10.11% | 1859.8 | 4.26% | motif file (matrix) |
svg |
18 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.882e+00 | 0.0207 | 16.0 | 8.99% | 1613.4 | 3.70% | motif file (matrix) |
svg |
19 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.786e+00 | 0.0216 | 5.0 | 2.81% | 188.3 | 0.43% | motif file (matrix) |
svg |
20 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -6.724e+00 | 0.0219 | 16.0 | 8.99% | 1638.2 | 3.76% | motif file (matrix) |
svg |
21 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -6.653e+00 | 0.0224 | 20.0 | 11.24% | 2309.7 | 5.30% | motif file (matrix) |
svg |
22 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -6.625e+00 | 0.0224 | 14.0 | 7.87% | 1342.5 | 3.08% | motif file (matrix) |
svg |
23 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -6.473e+00 | 0.0245 | 6.0 | 3.37% | 300.0 | 0.69% | motif file (matrix) |
svg |
24 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.966e+00 | 0.0389 | 15.0 | 8.43% | 1603.8 | 3.68% | motif file (matrix) |
svg |
25 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.603e+00 | 0.0537 | 4.0 | 2.25% | 152.2 | 0.35% | motif file (matrix) |
svg |
26 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-2 | -5.543e+00 | 0.0548 | 16.0 | 8.99% | 1846.1 | 4.23% | motif file (matrix) |
svg |
27 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.388e+00 | 0.0616 | 48.0 | 26.97% | 8179.5 | 18.75% | motif file (matrix) |
svg |
28 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -5.111e+00 | 0.0784 | 4.0 | 2.25% | 175.6 | 0.40% | motif file (matrix) |
svg |
29 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.856e+00 | 0.0977 | 6.0 | 3.37% | 418.4 | 0.96% | motif file (matrix) |
svg |
30 |
| HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.741e+00 | 0.1060 | 4.0 | 2.25% | 195.8 | 0.45% | motif file (matrix) |
svg |
31 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -4.656e+00 | 0.1116 | 20.0 | 11.24% | 2765.8 | 6.34% | motif file (matrix) |
svg |