Information for 7-CCAGCCTGGS (Motif 9)

A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G
Reverse Opposite:
A T G C G A T C G T A C C G T A A C T G A T C G G T A C G A C T C T A G T C A G
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.638
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif12.36%
Number of Background Sequences with motif1757.9
Percentage of Background Sequences with motif4.03%
Average Position of motif in Targets42.3 +/- 25.4bp
Average Position of motif in Background51.1 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCAGCCTGGS
BCAGACWA--
 A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCAGCCTGGS
-AGGCCTAG-
 A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCCTGGS
NNACTTGCCTT--
 A C G T A C G T A C G T A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCAGCCTGGS
-AGGCCTNG-
 A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCAGCCTGGS---
--TGCCTGAGGCN
 A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCAGCCTGGS
-CAGCC----
 A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CCAGCCTGGS
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCAGCCTGGS---
--NGCCTGAGGCN
 A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCAGCCTGGS---
--NGCCTNAGGCN
 A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAGCCTGGS--
--WDNCTGGGCA
 A G T C G A T C C T G A A C T G A T G C A G T C C G A T C A T G C T A G T A C G A C G T A C G T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A