Information for 7-TCCCTGCTGTTGTCTT (Motif 8)

A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C T G A C T G A C T G C G T A
p-value:1e-7
log p-value:-1.624e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.7 +/- 20.8bp
Average Position of motif in Background70.6 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTGCTGTTGTCTT
CCCCCTGCTGTG-----
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCCTGCTGTTGTCTT
--CCAGCTGTTN----
 A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCCCTGCTGTTGTCTT
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCCTGCTGTTGTCTT
--CCTGCTGAGH----
 A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCCCTGCTGTTGTCTT
---CAGCTGTT-----
 A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTGCTGTTGTCTT
NNTCCTGCTGTGNNN--
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTGCTGTTGTCTT
TNTCCTGCTGTGNNG--
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCCTGCTGTTGTCTT
----TCCTGTTTACA-
 A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCCCTGCTGTTGTCTT
NNGCAGCTGTT-----
 A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCCCTGCTGTTGTCTT---
----NNNTGTTGTTGTTNG
 A C G T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G