p-value: | 1e-13 |
log p-value: | -3.104e+01 |
Information Content per bp: | 1.903 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.75% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 62.2 +/- 19.0bp |
Average Position of motif in Background | 62.2 +/- 8.9bp |
Strand Bias (log2 ratio + to - strand density) | 3.2 |
Multiplicity (# of sites on avg that occur together) | 1.43 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTGTCTGCACTTC VBSYGTCTGG----- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGTCTGCACTTC CTGTCTGG----- |
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PB0026.1_Gm397_1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGTCTGCACTTC-- NNGTATGTGCACATNNN |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGTCTGCACTTC TWGTCTGV----- |
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Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTGTCTGCACTTC--- NSTGTTTRCWCAGBNNN |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGTCTGCACTTC NNTNNTGTCTGGNNTNG |
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PB0104.1_Zscan4_1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGTCTGCACTTC-- NTNTATGTGCACATNNN |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGTCTGCACTTC NNGCGTGTGTGCNGCN- |
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Mafb/MA0117.2/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGTCTGCACTTC -NGTCAGCANTTT |
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Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTGTCTGCACTTC SCTGTCARCACC-- |
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