Information for 11-GCAKKSGWCCCGC (Motif 25)

A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G A C T G C G A T A G T C A T C G T G C A G T A C A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.844e+01
Information Content per bp:1.876
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.0 +/- 22.3bp
Average Position of motif in Background48.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCAKKSGWCCCGC--
-----GGTCCCGCCC
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCAKKSGWCCCGC-------
---TACGCCCCGCCACTCTG
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCAKKSGWCCCGC----
-----GGCCCCGCCCCC
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCAKKSGWCCCGC--
----NNTTCCCGCCC
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCAKKSGWCCCGC--------
------GCCCCGCCCCCTCCC
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAKKSGWCCCGC------
---TCGTACCCGCATCATT
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCAKKSGWCCCGC--
----NCTTCCCGCCC
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCAKKSGWCCCGC---
------TACCCGCATN
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCAKKSGWCCCGC-
----NYTTCCCGCC
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCAKKSGWCCCGC---
-----GTACCCGCATN
 A C T G A G T C C G T A A C T G A C G T A T G C A C T G G C T A A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G