Information for 11-ACCGTCTGGC (Motif 23)

C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A T C G G C T A T G A C A C T G A C T G G A C T
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.844
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif115.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets48.2 +/- 28.2bp
Average Position of motif in Background52.2 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ACCGTCTGGC
-CTGTCTGG-
 C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ACCGTCTGGC--
--GGTCTGGCAT
 C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ACCGTCTGGC
VBSYGTCTGG-
 A C G T C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ACCGTCTGGC----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----ACCGTCTGGC---
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACCGTCTGGC
GCCATCTGTT
 C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACCGTCTGGC----
--TGTCTGDCACCT
 C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.66
Offset:5
Orientation:forward strand
Alignment:ACCGTCTGGC-
-----TTGGCA
 C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ACCGTCTGGC---
----NTTGGCANN
 C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACCGTCTGGC
RCCATMTGTT
 C T G A T G A C A G T C A C T G C G A T A T G C A C G T A C T G A C T G A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T