Information for 2-TGCGCTTTCC (Motif 2)

A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C
Reverse Opposite:
T C A G C A T G C T G A C T G A C G T A C A T G A G T C A C T G T G A C T G C A
p-value:1e-14
log p-value:-3.407e+01
Information Content per bp:1.652
Number of Target Sequences with motif128.0
Percentage of Target Sequences with motif13.70%
Number of Background Sequences with motif2980.8
Percentage of Background Sequences with motif6.46%
Average Position of motif in Targets52.2 +/- 27.3bp
Average Position of motif in Background50.2 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCGCTTTCC
GGGGATTTCC
 A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

IRF2/MA0051.1/Jaspar

Match Rank:2
Score:0.68
Offset:-8
Orientation:reverse strand
Alignment:--------TGCGCTTTCC
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCGCTTTCC
GGGAATTTCC
 A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGCGCTTTCC---
---ATTTTCCATT
 A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCGCTTTCC
GGGGATTTCC
 A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCTTTCC
TTGCGGTTT--
 A C G T A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGCGCTTTCC---
---ATTTTCCATT
 A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCGCTTTCC-
ANTTTCGCTTTCGN
 A C G T A C G T A C G T A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCGCTTTCC-
NGGGGATTTCCC
 A C G T A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGCGCTTTCC--
--CACATTCCAT
 A C G T A C T G T G A C T C A G G T A C G C A T G A C T G A C T G T A C A G T C A C G T A C G T
A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T