Information for 11-GGGWAATKACCCN (Motif 16)

C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A
Reverse Opposite:
A G C T A C T G C T A G A C T G C G A T G T A C G T C A A C G T A C G T G C T A A G T C A G T C G T A C
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.721
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.7 +/- 20.3bp
Average Position of motif in Background75.9 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGGWAATKACCCN
-GGAAATTCCC--
 C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGWAATKACCCN
NGGGGATTTCCC--
 A C G T C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGWAATKACCCN--
GGGCGATGACCAYTC
 C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGWAATKACCCN--
NNNGTAATTACNNATA
 A C G T C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGWAATKACCCN--
AAGGTAATTACCTAAT
 A C G T C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGWAATKACCCN
-GGAAATTCCC--
 C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GGGWAATKACCCN
------TGACCT-
 C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGWAATKACCCN--
AAGGTAATTAGCTCAT
 A C G T C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A A C G T A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGWAATKACCCN
AGGGGAATCCCCT-
 A C G T C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGWAATKACCCN
-GGAAATCCCC--
 C A T G C T A G C T A G C G A T G T C A G T C A A C G T A C T G C G T A A G T C A G T C G T A C T C G A
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T